Sirolimus (CED0001569)

Record Information
Version1.0
Creation Date2009-07-21 20:27:53 UTC
Update Date2026-05-14 16:51:26 UTC
SynCED IDCED0001569
Secondary Accession Numbers
  • CHEM002295
  • T3D2921
Identification
Common NameSirolimus
ClassSmall Molecule
Description
Sirolimus belongs to the macrolide lactams, a class of phenylpropanoids and polyketides within the organic compounds. With an average molecular weight of 914.19 g/mol, Sirolimus is a heavy molecule. This exogenous solid, with the formula C51H79NO13, is a bacterial metabolite. It functions as an mTOR inhibitor and is utilized as an immunosuppressive agent, antifungal agent, antineoplastic agent, antibiotic, and antibacterial drug. It is found in pharmaceutical, veterinary, and healthcare products, specifically within categories for antibiotics, ophthalmologicals, immunosuppressants, and antineoplastic agents. Recorded exposure routes include oral, intravenous, topical, and inhalation, and the compound has been detected in the liver and kidney. Sirolimus targets four proteins: Eukaryotic translation initiation factor 4E (EIF4E), Fibroblast growth factor 2 (FGF2), Serine/threonine-protein kinase mTOR (MTOR), and Peptidyl-prolyl cis-trans isomerase FKBP1A. By binding to the immunophilin FK Binding Protein-12 (FKBP-12) in cells, sirolimus generates an immunosuppressive complex that inhibits antibody production and the activation and proliferation of T lymphocytes. This process occurs in response to cytokine stimulation (Interleukin IL-2, IL-4, and IL-15) and antigenic stimulation through a mechanism distinct from other immunosuppressants. The resulting sirolimus:FKBP-12 complex has no effect on calcineurin activity.
Contaminant Type
  • Amide
  • Amine
  • Anti-Bacterial Agent
  • Antibiotic, Antineoplastic
  • Antifungal Agent
  • Drug
  • Ester
  • Ether
  • Human Neurotoxin
  • Immunosuppressive Agent
  • Macrolide
  • Metabolite
  • Organic Compound
  • Synthetic Compound
Chemical Structure
SynonymsNot Available
Chemical FormulaC51H79NO13
Average Molecular Mass914.187 g/mol
Monoisotopic Mass913.555 g/mol
CAS Registry Number53123-88-9
IUPAC Name(16E,24E,26E,28Z)-1,18-dihydroxy-12-[1-(4-hydroxy-3-methoxycyclohexyl)propan-2-yl]-19,30-dimethoxy-15,17,21,23,29,35-hexamethyl-11,36-dioxa-4-azatricyclo[30.3.1.0⁴,⁹]hexatriaconta-16,24,26,28-tetraene-2,3,10,14,20-pentone
Traditional Namesirolimus
SMILES[H]\C1=C(\[H])/C(/[H])=C(\[H])/C(/[H])=C(C)\C(CC2CCC(C)C(O)(O2)C(=O)C(=O)N2CCCCC2C(=O)OC(CC(=O)C(C)\C([H])=C(C)\C(O)C(OC)C(=O)C(C)CC1C)C(C)CC1CCC(O)C(C1)OC)OC
InChI IdentifierInChI=1S/C51H79NO13/c1-30-16-12-11-13-17-31(2)42(61-8)28-38-21-19-36(7)51(60,65-38)48(57)49(58)52-23-15-14-18-39(52)50(59)64-43(33(4)26-37-20-22-40(53)44(27-37)62-9)29-41(54)32(3)25-35(6)46(56)47(63-10)45(55)34(5)24-30/h11-13,16-17,25,30,32-34,36-40,42-44,46-47,53,56,60H,14-15,18-24,26-29H2,1-10H3/b13-11+,16-12+,31-17-,35-25+
InChI KeyQFJCIRLUMZQUOT-LYULEKIKSA-N
Chemical Taxonomy
Description Belongs to the class of organic compounds known as macrolide lactams. These are cyclic polyketides containing both a cyclic amide and a cyclic ester group.
KingdomOrganic compounds
Super ClassPhenylpropanoids and polyketides
ClassMacrolide lactams
Sub ClassNot Available
Direct ParentMacrolide lactams
Alternative Parents
Substituents
  • Macrolide lactam
  • Alpha-amino acid ester
  • Macrolide
  • Alpha-amino acid or derivatives
  • Cyclohexanol
  • Oxane
  • Piperidine
  • Cyclic alcohol
  • Tertiary carboxylic acid amide
  • Cyclic ketone
  • Secondary alcohol
  • Carboxamide group
  • Carboxylic acid ester
  • Hemiacetal
  • Ketone
  • Lactam
  • Lactone
  • Organoheterocyclic compound
  • Azacycle
  • Carboxylic acid derivative
  • Oxacycle
  • Dialkyl ether
  • Ether
  • Monocarboxylic acid or derivatives
  • Organopnictogen compound
  • Alcohol
  • Organic oxygen compound
  • Carbonyl group
  • Organooxygen compound
  • Organonitrogen compound
  • Organic nitrogen compound
  • Hydrocarbon derivative
  • Organic oxide
  • Aliphatic heteropolycyclic compound
Molecular FrameworkAliphatic heteropolycyclic compounds
External DescriptorsNot Available
Biological Properties
StatusDetected and Not Quantified
OriginExogenous
Cellular Locations
  • Cytoplasm
  • Membrane
Biofluid LocationsNot Available
Tissue Locations
  • Kidney
  • Liver
Applications
Biological Roles
Chemical Roles
Organoleptic Effects
  • pale orange colour ?
Physical Properties
StateSolid
AppearanceWhite powder.
Experimental Properties
PropertyValue
Melting Point183-185°C
Boiling PointNot Available
Solubility1.73e-03 g/L
Predicted Properties
PropertyValueSource
Water Solubility0.0017 g/LALOGPS
logP4.85ALOGPS
logP7.45ChemAxon
logS-5.7ALOGPS
pKa (Strongest Acidic)9.96ChemAxon
pKa (Strongest Basic)-3ChemAxon
Physiological Charge0ChemAxon
Hydrogen Acceptor Count12ChemAxon
Hydrogen Donor Count3ChemAxon
Polar Surface Area195.43 ŲChemAxon
Rotatable Bond Count6ChemAxon
Refractivity250.66 m³·mol⁻¹ChemAxon
Polarizability101.27 ųChemAxon
Number of Rings4ChemAxon
BioavailabilityNoChemAxon
Rule of FiveNoChemAxon
Ghose FilterNoChemAxon
Veber's RuleNoChemAxon
MDDR-like RuleYesChemAxon
Spectra
Spectra
Spectrum TypeDescriptionSplash KeyDeposition DateView
Predicted LC-MS/MSPredicted LC-MS/MS Spectrumsplash10-03dj-0100000295-538de958471c20cea7a0Not AvailableView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrumsplash10-001j-0632390280-a3032c3e232d4a2c7bdfNot AvailableView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrumsplash10-01wr-0814113910-19c7692bfd13e245e54dNot AvailableView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrumsplash10-03di-0613322389-d91ce39dafa2a54bef2cNot AvailableView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrumsplash10-014i-0202013090-dae32b81660bfccea140Not AvailableView Spectrum
Predicted LC-MS/MSPredicted LC-MS/MS Spectrumsplash10-000i-0925201100-d361305ce62d4f62a9ffNot AvailableView Spectrum
Toxicity Profile
Toxicity Values
Toxicity ValueOrganismDose DescriptorRoute of ExposurePredicted or ExperimentalToxicity RatingReference
800.0 mg/kg >800ratLD50oralexperimentalNot Available8
800.0 mg/kg >800miceLD50oralexperimentalNot Available8
522.0 Log mg/kg [290:930]RatLD50oralpredictedNot AvailableNot Available
Toxicity / Toxin ClassNot Available
Mechanism of ToxicitySirolimus inhibits T lymphocyte activation and proliferation that occurs in response to antigenic and cytokine (Interleukin IL-2, IL-4, and IL-15) stimulation by a mechanism that is distinct from that of other immunosuppressants. Sirolimus also inhibits antibody production. In cells, sirolimus binds to the immunophilin, FK Binding Protein-12 (FKBP-12), to generate an immunosuppressive complex. The sirolimus:FKBP-12 complex has no effect on calcineurin activity. This complex binds to and inhibits the activation of the mammalian Target Of Rapamycin (mTOR), a key regulatory kinase. This inhibition suppresses cytokine-driven T-cell proliferation, inhibiting the progression from the G1 to the S phase of the cell cycle.
Carcinogenicity (IARC Classification)No indication of carcinogenicity to humans (not listed by IARC).
Minimum Risk LevelNot Available
SymptomsThe most common ( ≥ 30%) adverse reactions observed with Rapamune in clinical studies are: peripheral edema, hypertriglyceridemia, hypertension, hypercholesterolemia, creatinine increased, constipation, abdominal pain, diarrhea, headache, fever, urinary tract infection, anemia, nausea, arthralgia, pain, and thrombocytopenia. (8)
TreatmentGeneral supportive measures should be followed in all cases of overdose. Based on the low aqueous solubility and high erythrocyte and plasma protein binding of sirolimus, it is anticipated that sirolimus is not dialyzable to any significant extent. (7)
Health Effects
Health EffectRelationshipDirectionDescriptionReference
inflammationHas Therapeutic Effect OnNot AvailableNot AvailablePMC13462034 , PMC10093942
cancerAssociated With?Not AvailableCancer is a group of diseases involving abnormal cell growth with the potential to invade or spread to other parts of the body. Possible signs and symptoms include a lump, abnormal bleeding, prolonged cough, unexplained weight loss, and a change in bowel movements. There are over 100 types of cancers affect humans. The risk of developing certain cancers can be reduced by not smoking, maintaining a healthy weight, not drinking too much alcohol, eating plenty of vegetables, fruits and whole grains, vaccination against certain infectious diseases, not eating too much processed and red meat and avoiding too much sunlight exposure. Cancer is often treated with some combination of radiation therapy, surgery, chemotherapy and targeted therapy. The majority of cancers, some 90–95% of cases, are due to genetic mutations from environmental and lifestyle factors. The remaining 5–10% are due to inherited genetics.PMC6724535
cancerNot AvailableNot AvailableCancer is a group of diseases involving abnormal cell growth with the potential to invade or spread to other parts of the body. Possible signs and symptoms include a lump, abnormal bleeding, prolonged cough, unexplained weight loss, and a change in bowel movements. There are over 100 types of cancers affect humans. The risk of developing certain cancers can be reduced by not smoking, maintaining a healthy weight, not drinking too much alcohol, eating plenty of vegetables, fruits and whole grains, vaccination against certain infectious diseases, not eating too much processed and red meat and avoiding too much sunlight exposure. Cancer is often treated with some combination of radiation therapy, surgery, chemotherapy and targeted therapy. The majority of cancers, some 90–95% of cases, are due to genetic mutations from environmental and lifestyle factors. The remaining 5–10% are due to inherited genetics.PMC6889802 , PMC13234310
cancerHas Therapeutic Effect OnNot AvailableCancer is a group of diseases involving abnormal cell growth with the potential to invade or spread to other parts of the body. Possible signs and symptoms include a lump, abnormal bleeding, prolonged cough, unexplained weight loss, and a change in bowel movements. There are over 100 types of cancers affect humans. The risk of developing certain cancers can be reduced by not smoking, maintaining a healthy weight, not drinking too much alcohol, eating plenty of vegetables, fruits and whole grains, vaccination against certain infectious diseases, not eating too much processed and red meat and avoiding too much sunlight exposure. Cancer is often treated with some combination of radiation therapy, surgery, chemotherapy and targeted therapy. The majority of cancers, some 90–95% of cases, are due to genetic mutations from environmental and lifestyle factors. The remaining 5–10% are due to inherited genetics.PMC13259829
Alzheimer's diseaseNot AvailableNot AvailableA neurodegenerative disease which causes neural atrophy, leading to dementia and memory loss.PMC13257514 , PMC12644199
Alzheimer's diseaseHas Therapeutic Effect OnNot AvailableA neurodegenerative disease which causes neural atrophy, leading to dementia and memory loss.PMC11594972
breast cancerHas Therapeutic Effect OnNot AvailableA breast cancer that has material basis in abnormally proliferating cells derives from epithelial cells. (DO)PMC6720003
breast cancerNot AvailableNot AvailableA breast cancer that has material basis in abnormally proliferating cells derives from epithelial cells. (DO)PMC4766360
type 2 diabetes mellitusAssociated With?Not AvailableNot AvailablePMC11847700 , PMC13259829
infertilityAssociated With?Not AvailableA disorder characterized by the inability to reproduce by natural means.PMC12569431
diabetes mellitusHas Therapeutic Effect OnNot AvailableA glucose metabolism disease characterized by chronic hyperglycaemia with disturbances of carbohydrate, fat and protein metabolism resulting from defects in insulin secretion, insulin action, or both. (DO)PMC11847700
weight gainHas Therapeutic Effect OnNot AvailableA finding characterized by an increase in overall body weight; for pediatrics, greater than the baseline growth curve. (NCI CTCAE)PMC6446929
Hepatocellular carcinomaHas Therapeutic Effect OnNot AvailableA liver carcinoma that has material basis in undifferentiated hepatocytes. (DO)PMC6720003
obesityHas Therapeutic Effect OnNot AvailableA disorder characterized by having a high amount of body fat. (NCI CTCAE)PMC6446929
atherosclerosisNot AvailableNot AvailableA disorder involving build-up of fatty material and calcium deposition in the arterial wall. It results in partial or complete occlusion of the arterial lumen.PMC13462034 , PMC11086401
glioblastomaHas Therapeutic Effect OnNot AvailableA type of brain tumor characterized by its aggressiveness and believed to originate from astrocytes.PMC4800996
heart failureNot AvailableNot AvailableA disorder characterized by the inability of the heart to pump blood at an adequate volume to meet tissue metabolic requirements, or, the ability to do so only at an elevation in the filling pressure. (NCI CTCAE)PMC10968160
heart failureHas Therapeutic Effect OnNot AvailableA disorder characterized by the inability of the heart to pump blood at an adequate volume to meet tissue metabolic requirements, or, the ability to do so only at an elevation in the filling pressure. (NCI CTCAE)PMC7432514
myocardial infarctionHas Therapeutic Effect OnNot AvailableA disorder characterized by gross necrosis of the myocardium; this is due to an interruption of blood supply to the area. (NCI CTCAE)PMC13234310
cognitive impairmentHas Therapeutic Effect OnNot AvailableNot AvailablePMC12617833
renal cell carcinomaHas Therapeutic Effect OnNot AvailableA renal carcinoma that has material basis in the lining of the proximal convoluted renal tubule of the kidney. (DO)PMC6720003 , PMC9476305
renal cell carcinomaNot AvailableNot AvailableA renal carcinoma that has material basis in the lining of the proximal convoluted renal tubule of the kidney. (DO)PMC4766360 , PMC4915159
ovarian cancerHas Therapeutic Effect OnNot AvailableA female reproductive organ cancer that is located in the ovary. (DO)PMC4800996
coronary artery diseaseNot AvailableNot AvailableAn artery disease that is characterized by plaque building up along the inner walls of the arteries of the heart resulting in a narrowing of the arteries and a reduced blood supply to the cardiac muscles. (DO)PMC9229942
coronary artery diseaseHas Therapeutic Effect OnNot AvailableAn artery disease that is characterized by plaque building up along the inner walls of the arteries of the heart resulting in a narrowing of the arteries and a reduced blood supply to the cardiac muscles. (DO)PMC7432514
hyperglycemiaAssociated With?Not AvailableA disorder characterized by laboratory test results that indicate an elevation in the concentration of blood sugar. It is usually an indication of diabetes mellitus or glucose intolerance. (NCI CTCAE)PMC6446929 , PMC6446929
pulmonary fibrosisHas Therapeutic Effect OnNot AvailableNot AvailablePMC12618133 , PMC6406971
pulmonary fibrosisNot AvailableNot AvailableNot AvailablePMC7241096
epilepsyHas Therapeutic Effect OnNot AvailableA brain disease that is characterized by the occurrance of at least two unprovoked seizures resulting from a persistent epileptogenic abnormality of the brain that is able to spontaneously generate paroxysmal activity and typically manifested by sudden brief episodes of altered or diminished consciousness, involuntary movements, or convulsions. (DO)PMC10081384
epilepsyNot AvailableNot AvailableA brain disease that is characterized by the occurrance of at least two unprovoked seizures resulting from a persistent epileptogenic abnormality of the brain that is able to spontaneously generate paroxysmal activity and typically manifested by sudden brief episodes of altered or diminished consciousness, involuntary movements, or convulsions. (DO)PMC10041171
EndometriosisNot AvailableNot AvailableEndometriosis is a condition that affects women in which cells similar to those in the endometrium, the layer of tissue that normally covers the inside of the uterus, grow outside the uterus (mainly in the ovaries and fallopian tubes). The main symptoms are pelvic pain and infertility, although 20-25% of women are asymptomatic. Pain during sexual intercourse is also common. Other symptoms include diarrhea or constipation, chronic fatigue, nausea and vomiting, headaches, low-grade fevers, heavy and/or irregular periods, and hypoglycemia. Endometriosis is a common condition. About 6–10% of women are affected. Endometriosis is most common in those in their thirties and forties; however, it can begin in girls as early as eight years old.PMC12249650 , PMC12249650
pancreatic cancerHas Therapeutic Effect OnNot AvailableAn endocrine gland cancer located in the pancreas. (DO)PMC6889802 , PMC6889802
neurodegenerative diseaseHas Therapeutic Effect OnNot AvailableA central nervous system disease that results in the progressive deterioration of function or structure of neurons. (DO)PMC8779661
neurodegenerative diseaseNot AvailableNot AvailableA central nervous system disease that results in the progressive deterioration of function or structure of neurons. (DO)PMC13037075
hepatic steatosisHas Therapeutic Effect OnNot AvailableNot AvailablePMC12950263
sclerodermaHas Therapeutic Effect OnNot AvailableNot AvailablePMC2705917
autoimmune diseaseNot AvailableNot AvailableAn autoimmune disease is a condition arising from an abnormal immune response to a functioning body part. There are at least 80 types of autoimmune diseases. Nearly any body part can be involved. Common symptoms include low grade fever and feeling tired. Some autoimmune diseases such as lupus run in families, and certain cases may be triggered by infections or other environmental factors. Some common diseases that are generally considered autoimmune include celiac disease, diabetes mellitus type 1, Graves' disease, inflammatory bowel disease, multiple sclerosis, psoriasis, rheumatoid arthritis, and systemic lupus erythematosus. About 24 million (7%) people in the United States are affected by an autoimmune disease. Women are more commonly affected than men.PMC5385174 , PMC6720003
kidney cancerNot AvailableNot AvailableA urinary system cancer that is located in the kidney. (DO)PMC4766360
osteonecrosisHas Therapeutic Effect OnNot AvailableA disorder characterized by necrotic changes in the bone tissue due to interruption of blood supply. Most often affecting the epiphysis of the long bones, the necrotic changes result in the collapse and the destruction of the bone structure. (NCI CTCAE)PMC11550091
glucose intoleranceAssociated With?Not AvailableA disorder characterized by an inability to properly metabolize glucose. (NCI CTCAE)PMC11847700 , PMC13259829
glucose intoleranceAssociated With?increaseA disorder characterized by an inability to properly metabolize glucose. (NCI CTCAE)PMC6446929
cystitisHas Therapeutic Effect OnNot AvailableNot AvailablePMC13150661
cystitisNot AvailableNot AvailableNot AvailablePMC4382282
mantle cell lymphomaHas Therapeutic Effect OnNot AvailableMantle cell lymphoma is a B-cell non-Hodgkin lymphoma (NHL). Lymphoma is a cancer of the lymphatic system, which is part of the body's germ-fighting network. The lymphatic system includes the lymph nodes (lymph glands), spleen, thymus gland, stomach and bone marrow. Mantle cell lymphoma typically develops in the outer edge of a lymph node called the mantle zone. Mantle cell lymphoma occurs more often in men than in women. It is usually diagnosed in people in their early 60s.PMC9476305
endometrial carcinomaHas Therapeutic Effect OnNot AvailableNot AvailablePMC9476305
lipid metabolism disorderAssociated With?Not AvailableNot AvailablePMC6446929 , PMC5686773
Cell DeathAssociated With?Not AvailableNot AvailablePMC6889802 , PMC5936715
Abnormality of mitochondrial metabolismHas Therapeutic Effect OnNot AvailableNot AvailablePMC13318692
Oxidative StressNot AvailableNot AvailableNot AvailablePMC9688603
Oxidative StressHas Therapeutic Effect OnNot AvailableNot AvailablePMC4382282 , PMC6823165
injuryHas Therapeutic Effect OnNot AvailableNot AvailablePMC9637239
cardiovascular disorderHas Therapeutic Effect OnNot AvailableNot AvailablePMC13234310
HypercholesterolemiaAssociated With?Not AvailableNot AvailablePMC6446929
gliomaNot AvailableNot AvailableNot AvailablePMC10573233
hearing loss disorderHas Therapeutic Effect OnNot AvailableNot AvailablePMC10815440
depressive disorderHas Therapeutic Effect OnNot AvailableNot AvailablePMC11806845
Body WeightHas Therapeutic Effect OnNot AvailableNot AvailablePMC6446929 , PMC6446929
Premature birthNot AvailableNot AvailableNot AvailablePMC4154493
high grade gliomaNot AvailableNot AvailableNot AvailablePMC9229942
ApoptosisHas Therapeutic Effect OnNot AvailableNot AvailablePMC9279723
acute kidney injuryHas Therapeutic Effect OnNot AvailableNot AvailablePMC10093942 , PMC10093942
NeurodegenerationHas Therapeutic Effect OnNot AvailableNot AvailablePMC10815440
hypertriglyceridemiaAssociated With?Not AvailableNot AvailablePMC6446929 , PMC6446929
hyperlipidemiaAssociated With?Not AvailableNot AvailablePMC6446929 , PMC6446929
Neutrophil InfiltrationHas Therapeutic Effect OnNot AvailableNot AvailablePMC6823165
Machado-Joseph diseaseHas Therapeutic Effect OnNot AvailableNot AvailablePMC8779661
Immunosuppression TherapyAssociated With?Not AvailableNot AvailablePMC10069916 , PMC13259829
Immunosuppression TherapyNot AvailableNot AvailableNot AvailablePMC2628649
AllodyniaHas Therapeutic Effect OnNot AvailableNot AvailablePMC13150661
degenerative disc diseaseNot AvailableNot AvailableNot AvailablePMC13007494
Graft RejectionNot AvailableNot AvailableNot AvailablePMC5923317 , PMC6446929
HamartomaNot AvailableNot AvailableNot AvailablePMC10081384
Atherosclerotic lesionHas Therapeutic Effect OnNot AvailableNot AvailablePMC12812629
Cutaneous Squamous Cell CarcinomaNot AvailableNot AvailableNot AvailablePMC12644199
pancreatic neuroendocrine tumorNot AvailableNot AvailableNot AvailablePMC4766360
Sjogren's syndromeNot AvailableNot AvailableNot AvailablePMC4142100
transplant rejectionNot AvailableNot AvailableNot AvailablePMC6720003
mild cognitive impairmentHas Therapeutic Effect OnNot AvailableNot AvailablePMC11806845
Cold intoleranceAssociated With?Not AvailableNot AvailablePMC12896175
Sturge-Weber syndromeHas Therapeutic Effect OnNot AvailableNot AvailablePMC11806845
SafetyAssociated With?Not AvailableNot AvailablePMC8486872
Exposure Sources
Source IDSourceSectorReference
CEDs000010Insecticides?Insecticides are synthetic chemicals designed to control or eliminate insect pests that threaten crops and other agricultural products.Agriculture & land managementPubChem
CEDs000013Soil?Soil serves as a critical medium for plant growth and sustains various ecological functions; however, it can become a reservoir for synthetic chemical contamination.Agriculture & land managementPMC12644199 , PMC2954037
CEDs000306Antibiotics?Antibiotics are synthetic or semi-synthetic compounds used to treat bacterial infections in humans and animals.Healthcare, pharmaceuticals & veterinary productsNot Available
CEDs000358Antineoplastic agents?Antineoplastic agents are a class of synthetic chemicals used primarily in the treatment of cancer.Healthcare, pharmaceuticals & veterinary productsNot Available
CEDs000362Immunosuppressants?Immunosuppressants are synthetic chemicals used to inhibit the immune response, primarily in patients undergoing organ transplants or those with autoimmune disorders.Healthcare, pharmaceuticals & veterinary productsNot Available
CEDs000405Ophthalmologicals?Ophthalmologicals are a category of synthetic chemicals used primarily for the treatment of eye disorders, including medications such as anti-inflammatories, antibiotics, and lubricants.Healthcare, pharmaceuticals & veterinary productsNot Available
CEDs000537Television Systems?Television systems can be a source of synthetic chemical contamination due to the various materials and components used in their manufacture and operation.Electrical & Electronic EquipmentPubChem
CEDs000545Food Preservation?Food preservation often involves the use of synthetic chemicals, such as preservatives, flavor enhancers, and color additives, to extend shelf life and enhance the sensory qualities of food products.Food, food processing & cookwarePubChem
CEDs000595Ships?Ships, as vehicles for international trade and transportation, can be significant sources of synthetic chemical contamination in marine environments.Marine, shipping & aquaculturePubChem
CEDs000605Pest Repellants?Pest repellents, often formulated from synthetic chemicals, are widely used to protect crops from insect infestations and other pests.Agriculture & land managementPubChem
CEDs000611Anti Perspirants Or Body Deoderants?Antiperspirants and body deodorants commonly contain synthetic chemicals such as aluminum compounds, parabens, and synthetic fragrances.Personal care & cosmeticsPubChem
CEDs000632Apparel?Apparel production often involves the use of various synthetic chemicals, including dyes, finishing agents, and preservatives.Textiles, leather & furnishingsPubChem
CEDs000662Yarns Or Threads?Yarns or threads used in textiles can be a source of synthetic chemical contamination due to the production processes and treatments they undergo.Textiles, leather & furnishingsPubChem
CEDs000671Airplanes And Helicopters?Airplanes and helicopters are significant sources of synthetic chemical contamination primarily through the use of aviation fuels, lubricants, and de-icing agents.Aviation & AerospacePubChem
CEDs000679Phosphatic Fertilisers?Phosphatic fertilizers are synthetic chemical products primarily composed of phosphorus, which is essential for plant growth.Agriculture & land managementPubChem
CEDs000685Ceramics?Ceramics can be a source of synthetic chemical contamination through various additives and processing agents used in their production.Building & ConstructionPubChem
CEDs000688Glass Coatings?Glass coatings are synthetic chemical formulations applied to glass surfaces to enhance properties such as durability, UV resistance, and aesthetic appeal.Building & ConstructionPubChem
CEDs000696Nanotechnology?Nanotechnology involves the manipulation of materials at the molecular or atomic level, typically within the range of 1 to 100 nanometers.Industrial manufacturing & chemical processingPubChem
CEDs000740Paper?Paper production involves the processing of wood fibers and the use of various chemicals, which can lead to synthetic chemical contamination.Paper, pulp & fiber productsPubChem
CEDs01144FoodFood, food processing & cookwarePMC4032600 , PMC4032600
CEDs01450Chow DietFood, food processing & cookwarePMC6446929
CEDs01771High Fat DietFood, food processing & cookwarePMC6446929
CEDs02255WaterAquatic systems & sedimentsPMC4901268
CEDs03380Stainless SteelMining & metal processingPMC3049546
Pathways
1 pathwayPathway Source: PathBank
Targets
StructureProteinUniProt IDOrganismRelationshipDetails
Peptidyl-prolyl cis-trans isomerase FKBP1A structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP1AP62942HumansKnownNot Available
Peptidyl-prolyl cis-trans isomerase FKBP1A structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP1AP26883Mus musculusPredicted (SEA)
Prediction Confidence Score
1.0
Applicability Domain
1.0
Statistical Significance
1.00e-05
Supporting Reference Compounds
2
E-value
0.0778492
Serine/threonine-protein kinase mTOR structureClick to view 3D structureSerine/threonine-protein kinase mTORP42345HumansPredicted (SEA)
Prediction Confidence Score
0.686
Applicability Domain
1.0
Statistical Significance
2.00e-04
Supporting Reference Compounds
403
E-value
1.55698
Peptidyl-prolyl cis-trans isomerase FKBP1A structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP1AP62942HumansPredicted (SEA)
Prediction Confidence Score
0.648
Applicability Domain
1.0
Statistical Significance
1.00e-05
Supporting Reference Compounds
21
E-value
0.0778492
Bile salt export pump structureClick to view 3D structureBile salt export pumpO95342HumansPredicted (SEA)
Prediction Confidence Score
0.648
Applicability Domain
1.0
Statistical Significance
5.00e-05
Supporting Reference Compounds
104
E-value
0.389246
Peptidyl-prolyl cis-trans isomerase FKBP5 structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP5Q13451HumansPredicted (SEA)
Prediction Confidence Score
0.458
Applicability Domain
1.0
Statistical Significance
2.10e-04
Supporting Reference Compounds
16
E-value
1.63483
Click to view 3D structureSerine/threonine-protein kinase mTORQ9JLN9Mus musculusPredicted (SEA)
Prediction Confidence Score
0.438
Applicability Domain
1.0
Statistical Significance
1.10e-04
Supporting Reference Compounds
20
E-value
0.856341
Peptidyl-prolyl cis-trans isomerase FKBP1B structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP1BP68106HumansPredicted (SEA)
Prediction Confidence Score
0.377
Applicability Domain
1.0
Statistical Significance
9.00e-05
Supporting Reference Compounds
8
E-value
0.700643
Cytochrome P450 3A4 structureClick to view 3D structureCytochrome P450 3A4P08684HumansPredicted (SEA)
Prediction Confidence Score
0.372
Applicability Domain
1.0
Statistical Significance
0.0351
Supporting Reference Compounds
1538
E-value
273.251
Peptidyl-prolyl cis-trans isomerase FKBP4 structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP4Q02790HumansPredicted (SEA)
Prediction Confidence Score
0.368
Applicability Domain
1.0
Statistical Significance
2.10e-04
Supporting Reference Compounds
16
E-value
1.63483
Solute carrier organic anion transporter family member 1B1 structureClick to view 3D structureSolute carrier organic anion transporter family member 1B1Q9Y6L6HumansPredicted (SEA)
Prediction Confidence Score
0.364
Applicability Domain
1.0
Statistical Significance
7.20e-04
Supporting Reference Compounds
82
E-value
5.60514
Nuclear receptor subfamily 1 group I member 2 structureClick to view 3D structureNuclear receptor subfamily 1 group I member 2O75469HumansPredicted (SEA)
Prediction Confidence Score
0.36
Applicability Domain
1.0
Statistical Significance
0.0018
Supporting Reference Compounds
146
E-value
13.7793
Broad substrate specificity ATP-binding cassette transporter ABCG2 structureClick to view 3D structureBroad substrate specificity ATP-binding cassette transporter ABCG2Q9UNQ0HumansPredicted (SEA)
Prediction Confidence Score
0.349
Applicability Domain
1.0
Statistical Significance
0.0081
Supporting Reference Compounds
126
E-value
62.8243
ATP-dependent translocase ABCB1 structureClick to view 3D structureATP-dependent translocase ABCB1P08183HumansPredicted (SEA)
Prediction Confidence Score
0.331
Applicability Domain
1.0
Statistical Significance
0.008
Supporting Reference Compounds
139
E-value
62.4351
Cytochrome P450 2C9 structureClick to view 3D structureCytochrome P450 2C9P11712HumansPredicted (SEA)
Prediction Confidence Score
0.319
Applicability Domain
1.0
Statistical Significance
0.0826
Supporting Reference Compounds
1245
E-value
642.879
Cytochrome P450 2C19 structureClick to view 3D structureCytochrome P450 2C19P33261HumansPredicted (SEA)
Prediction Confidence Score
0.311
Applicability Domain
1.0
Statistical Significance
0.0513
Supporting Reference Compounds
825
E-value
399.133
Eukaryotic translation initiation factor 4E structureClick to view 3D structureEukaryotic translation initiation factor 4EP06730HumansPredicted (SEA)
Prediction Confidence Score
0.287
Applicability Domain
1.0
Statistical Significance
3.20e-04
Supporting Reference Compounds
12
E-value
2.49118
Pyruvate kinase PKM structureClick to view 3D structurePyruvate kinase PKMP14618HumansPredicted (SEA)
Prediction Confidence Score
0.286
Applicability Domain
1.0
Statistical Significance
0.002
Supporting Reference Compounds
29
E-value
15.7255
Programmed cell death protein 4 structureClick to view 3D structureProgrammed cell death protein 4Q53EL6HumansPredicted (SEA)
Prediction Confidence Score
0.265
Applicability Domain
1.0
Statistical Significance
1.00e-05
Supporting Reference Compounds
5
E-value
0.0778492
Protein phosphatase 3 catalytic subunit alpha structureClick to view 3D structureProtein phosphatase 3 catalytic subunit alphaQ08209HumansPredicted (SEA)
Prediction Confidence Score
0.212
Applicability Domain
0.375
Statistical Significance
5.30e-04
Supporting Reference Compounds
7
E-value
4.12601
V-type proton ATPase subunit S1 structureClick to view 3D structureV-type proton ATPase subunit S1Q15904HumansPredicted (SEA)
Prediction Confidence Score
0.198
Applicability Domain
0.211 Low confidence
Statistical Significance
8.00e-05
Supporting Reference Compounds
2
E-value
0.622794
ATP synthase subunit beta, mitochondrial structureClick to view 3D structureATP synthase subunit beta, mitochondrialP00830Saccharomyces cerevisiae S288cPredicted (SEA)
Prediction Confidence Score
0.194
Applicability Domain
0.194 Low confidence
Statistical Significance
1.40e-04
Supporting Reference Compounds
1
E-value
1.08989
Adenosine receptor A3 structureClick to view 3D structureAdenosine receptor A3P0DMS8HumansPredicted (SEA)
Prediction Confidence Score
0.192
Applicability Domain
0.245 Low confidence
Statistical Significance
0.7028
Supporting Reference Compounds
391
E-value
5471.48
Click to view 3D structureATP-dependent clpX-like chaperone, mitochondrialO76031HumansPredicted (SEA)
Prediction Confidence Score
0.188
Applicability Domain
0.188 Low confidence
Statistical Significance
0.0031
Supporting Reference Compounds
1
E-value
24.5225
Click to view 3D structureV-type proton ATPase subunit CQ9U5N1Manduca sextaPredicted (SEA)
Prediction Confidence Score
0.183
Applicability Domain
0.183 Low confidence
Statistical Significance
4.00e-04
Supporting Reference Compounds
1
E-value
3.11397
Heat shock protein HSP 90-alpha structureClick to view 3D structureHeat shock protein HSP 90-alphaP07900HumansPredicted (SEA)
Prediction Confidence Score
0.178
Applicability Domain
0.184 Low confidence
Statistical Significance
0.5699
Supporting Reference Compounds
109
E-value
4437.02
Serine/threonine-protein kinase mTOR structureClick to view 3D structureSerine/threonine-protein kinase mTORP42345HumansKnownNot Available
Regulatory-associated protein of mTOR structureClick to view 3D structureRegulatory-associated protein of mTORQ8N122HumansKnownNot Available
Peptidyl-prolyl cis-trans isomerase FKBP14 structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP14Q9NWM8HumansKnownNot Available
Serine/threonine-protein kinase mTOR structureClick to view 3D structureSerine/threonine-protein kinase mTORP42345HumansKnownNot Available
Peptidyl-prolyl cis-trans isomerase FKBP1A structureClick to view 3D structurePeptidyl-prolyl cis-trans isomerase FKBP1AP62942HumansKnownSirolimus inhibits T lymphocyte activation and proliferation that occurs in response to antigenic and cytokine (Interleukin IL-2, IL-4, and IL-15) stimulation by a mechanism that is distinct from that of other immunosuppressants. Sirolimus also inhibits antibody production. In cells, sirolimus binds to the immunophilin, FK Binding Protein-12 (FKBP-12), to generate an immunosuppressive complex. The sirolimus:FKBP-12 complex has no effect on calcineurin activity. This complex binds to and inhibits the activation of the mammalian Target Of Rapamycin (mTOR), a key regulatory kinase. This inhibition suppresses cytokine-driven T-cell proliferation, inhibiting the progression from the G1 to the S phase of the cell cycle.
Eukaryotic translation initiation factor 4E structureClick to view 3D structureEukaryotic translation initiation factor 4EP06730HumansKnownNot Available
Fibroblast growth factor 2 structureClick to view 3D structureFibroblast growth factor 2P09038HumansKnownNot Available
Concentrations
Not Available
External Links
DrugBank IDNot Available
HMDB IDNot Available
FooDB IDNot Available
Phenol Explorer IDNot Available
KNApSAcK IDNot Available
BiGG IDNot Available
BioCyc IDNot Available
METLIN IDNot Available
PDB IDNot Available
Wikipedia LinkNot Available
Chemspider IDNot Available
ChEBI IDNot Available
PubChem Compound ID58863407
Kegg Compound IDNot Available
YMDB IDNot Available
ECMDB IDNot Available
References
Synthesis Reference

Madhup K. Dhaon, Chi-nung Hsiao, Subhash R. Patel, Peter J. Bonk, Sanjay R. Chemburkar, Yong Y. Chen, “One pot synthesis of tetrazole derivatives of sirolimus.” U.S. Patent US20080167335, issued July 10, 2008.

MSDSNot Available
General References
  1. Pritchard DI: Sourcing a chemical succession for cyclosporin from parasites and human pathogens. Drug Discov Today. 2005 May 15;10(10):688-91. [PubMed: 15896681]
  2. Shuchman M: Trading restenosis for thrombosis? New questions about drug-eluting stents. N Engl J Med. 2006 Nov 9;355(19):1949-52. [PubMed: 17093244]
  3. Sun SY, Rosenberg LM, Wang X, Zhou Z, Yue P, Fu H, Khuri FR: Activation of Akt and eIF4E survival pathways by rapamycin-mediated mammalian target of rapamycin inhibition. Cancer Res. 2005 Aug 15;65(16):7052-8. [PubMed: 16103051]
  4. Chan S: Targeting the mammalian target of rapamycin (mTOR): a new approach to treating cancer. Br J Cancer. 2004 Oct 18;91(8):1420-4. [PubMed: 15365568]
  5. Graziani EI: Recent advances in the chemistry, biosynthesis and pharmacology of rapamycin analogs. Nat Prod Rep. 2009 May;26(5):602-9. doi: 10.1039/b804602f. Epub 2009 Mar 5. [PubMed: 19387497]
  6. Drugs.com - http://www.drugs.com/cons/Sirolimus.html
  7. RxList: The Internet Drug Index (2009). - http://www.rxlist.com/
  8. RxList. Rapamune - http://www.rxlist.com/rapamune-drug.htm#